Given a list of tables, filter them by patient.
Examples
data(jellyfisher_example_tables)
jellyfisher_example_tables |>
select_patients("EOC809")
#> $samples
#> sample displayName rank parent patient
#> 368 EOC809_p2Bow1_c_DNA2 p2Bow1_c 3 EOC809
#> 369 EOC809_p2Ome1_c_DNA1 p2Ome1_c 3 EOC809
#> 370 EOC809_p2OvaL1_c_DNA6 p2OvaL1_c 3 EOC809
#> 371 EOC809_p2Per1_cO_DNA2 p2Per1_cO 3 EOC809
#> 372 EOC809_r1Bow1_DNA1 r1Bow1 10 EOC809_p2Bow1_c_DNA2 EOC809
#>
#> $phylogeny
#> subclone parent color branchLength patient
#> 611 1 -1 #cccccc 5787 EOC809
#> 612 2 12 #a6cee3 1646 EOC809
#> 613 4 10 #cab2d6 1020 EOC809
#> 614 10 15 #41ae76 567 EOC809
#> 615 11 10 #ff7f00 1102 EOC809
#> 616 12 1 #3de4c5 1544 EOC809
#> 617 14 12 #9933ff 2834 EOC809
#> 618 15 1 #3690c0 4452 EOC809
#>
#> $compositions
#> sample subclone clonalPrevalence patient
#> 1228 EOC809_p2Bow1_c_DNA2 4 0.6305 EOC809
#> 1229 EOC809_p2Bow1_c_DNA2 15 0.3700 EOC809
#> 1230 EOC809_p2Ome1_c_DNA1 1 0.0205 EOC809
#> 1231 EOC809_p2Ome1_c_DNA1 4 0.0545 EOC809
#> 1232 EOC809_p2Ome1_c_DNA1 10 0.3365 EOC809
#> 1233 EOC809_p2Ome1_c_DNA1 12 0.0305 EOC809
#> 1234 EOC809_p2Ome1_c_DNA1 15 0.5580 EOC809
#> 1235 EOC809_p2OvaL1_c_DNA6 11 0.6700 EOC809
#> 1236 EOC809_p2OvaL1_c_DNA6 15 0.3220 EOC809
#> 1237 EOC809_p2Per1_cO_DNA2 1 0.0345 EOC809
#> 1238 EOC809_p2Per1_cO_DNA2 2 0.5800 EOC809
#> 1239 EOC809_p2Per1_cO_DNA2 12 0.3855 EOC809
#> 1240 EOC809_r1Bow1_DNA1 12 0.0980 EOC809
#> 1241 EOC809_r1Bow1_DNA1 14 0.9000 EOC809
#>